Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014289.1 Corchorus capsularis cultivar CVL-1 contig14310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9894

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6554--6578
12
2.1
12
100
0
50
44
24
0
32
1.54
7459--7492
9
3.7
9
92
7
59
35
20
20
23
1.96
7462--7491
10
3.1
10
95
4
53
40
20
20
20
1.92
7489--7629
40
3.6
40
77
7
137
34
21
19
24
1.96
7612--7720
29
3.6
29
75
9
110
29
27
14
28
1.95
7564--7800
62
3.7
65
82
10
265
32
25
16
26
1.96
8299--8624
45
7.2
45
75
8
286
30
25
16
27
1.96
8595--8664
17
3.9
17
80
12
86
21
28
21
28
1.99
8615--8681
20
3.5
20
73
19
70
25
28
17
28
1.98
8598--8681
38
2.2
38
93
6
145
23
28
19
28
1.98
8833--9103
45
5.9
45
82
7
296
26
23
18
30
1.98
9344--9460
36
3.2
36
86
2
155
26
23
22
27
2.00
9620--9762
46
3.1
46
83
3
180
29
24
14
31
1.95

Tables:   1

The End!