Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014291.1 Corchorus capsularis cultivar CVL-1 contig14312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17679

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1928--1965
18
2.1
18
100
0
76
44
23
10
21
1.83
2149--2223
28
2.7
29
85
6
100
45
24
13
17
1.84
2572--2857
63
4.7
61
77
11
239
40
18
18
22
1.91
2700--2880
63
2.9
62
76
11
170
38
16
21
24
1.93
17219--17245
6
4.5
6
100
0
54
85
0
0
14
0.61
17377--17507
62
2.1
61
79
8
140
48
16
13
22
1.81

Tables:   1

The End!