Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014294.1 Corchorus capsularis cultivar CVL-1 contig14315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17397

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--518
6
4.2
6
100
0
50
16
0
0
84
0.63
4564--4613
21
2.4
22
83
16
70
18
28
4
50
1.65
4623--4662
14
2.9
14
85
7
55
20
20
10
50
1.76
4868--4961
40
2.4
40
80
5
113
25
18
8
47
1.76
4996--5078
38
2.1
40
82
6
98
21
19
6
53
1.67
6045--6088
16
2.6
17
89
7
72
22
0
2
75
0.92
10046--10257
36
6.3
31
75
15
149
40
8
18
32
1.82
10044--10269
102
2.2
103
81
7
262
40
9
18
31
1.82
13061--13106
22
2.1
22
100
0
92
52
13
4
30
1.59
13716--13767
10
4.8
10
77
15
50
13
26
46
13
1.80
17217--17307
28
3.4
27
67
21
75
47
8
10
32
1.70

Tables:   1

The End!