Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014295.1 Corchorus capsularis cultivar CVL-1 contig14316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3694

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1100--1135
19
1.9
18
88
5
54
33
22
2
41
1.68
1963--2054
33
2.8
32
80
7
105
19
18
18
43
1.88
1974--2069
33
2.9
32
77
7
95
18
18
19
42
1.89
3194--3318
27
4.7
27
88
2
198
44
22
15
17
1.86
3192--3318
53
2.4
54
94
1
229
45
22
14
17
1.85
3578--3637
26
2.3
26
80
8
70
41
20
13
25
1.88

Tables:   1

The End!