Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014296.1 Corchorus capsularis cultivar CVL-1 contig14317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3280

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--462
27
2.7
27
87
0
121
45
21
14
17
1.84
722--774
25
2.1
26
82
10
65
41
18
11
28
1.85
1140--1244
32
3.1
32
87
10
138
44
14
14
26
1.83
1038--1263
109
2.1
109
83
1
283
46
15
13
24
1.81
1075--1263
38
5.1
38
81
12
205
47
15
12
24
1.80
1533--1875
70
4.9
69
89
2
517
36
21
19
22
1.95
1944--2135
70
2.7
70
86
1
260
35
21
20
21
1.96

Tables:   1

The End!