Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014298.1 Corchorus capsularis cultivar CVL-1 contig14319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24121

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2282--2353
27
2.7
27
93
0
126
43
23
15
18
1.88
5744--5842
32
3.1
32
88
1
146
34
22
17
26
1.95
8856--8890
15
2.2
16
90
5
54
54
28
8
8
1.60
10575--10617
12
3.6
12
87
0
59
11
32
34
20
1.89
13040--13068
9
3.3
9
90
9
51
89
0
0
10
0.48
14271--14306
19
1.9
18
88
5
54
41
2
22
33
1.68
15591--15624
16
2.2
16
89
5
52
29
2
8
58
1.43
16435--16489
26
2.1
26
86
0
74
18
14
27
40
1.89
23741--23767
6
4.5
6
100
0
54
29
0
14
55
1.40

Tables:   1

The End!