Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014307.1 Corchorus capsularis cultivar CVL-1 contig14328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8086

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2826--2861
3
12.0
3
100
0
72
66
0
0
33
0.92
2876--2900
12
2.1
12
100
0
50
52
0
8
40
1.31
3642--3694
22
2.4
22
84
6
63
35
11
9
43
1.73
3598--3749
62
2.5
62
93
0
250
35
11
8
44
1.71
3657--3750
22
4.5
22
67
15
81
34
10
9
45
1.71
3715--4148
22
19.8
22
68
14
114
35
15
10
38
1.81
3866--4030
88
1.8
91
80
11
198
38
16
11
32
1.85
3961--4069
23
4.8
23
83
5
125
37
17
10
34
1.83
3963--4148
45
4.3
43
74
15
125
34
15
10
39
1.81
4013--4129
60
1.9
61
82
1
146
35
14
7
41
1.75
4257--4287
7
4.4
7
100
0
62
74
12
12
0
1.08
4839--4867
14
2.1
14
100
0
58
34
0
6
58
1.25
4853--4917
30
2.2
30
94
5
114
27
9
13
49
1.73
6814--6847
11
3.1
11
88
12
52
0
5
20
73
1.04

Tables:   1

The End!