Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014310.1 Corchorus capsularis cultivar CVL-1 contig14331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7601

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1213--1279
26
2.6
26
92
2
109
35
0
8
55
1.32
1235--1279
15
3.3
15
70
23
53
37
0
8
53
1.32
1157--1273
51
2.4
47
74
18
114
35
0
8
55
1.36
3200--3238
2
19.5
2
100
0
78
51
48
0
0
1.00
3238--3273
2
18.0
2
100
0
72
50
0
0
50
1.00
6450--6678
75
2.9
75
89
5
323
36
12
25
24
1.91
6445--6678
79
3.0
78
88
5
357
36
12
25
25
1.92

Tables:   1

The End!