Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014311.1 Corchorus capsularis cultivar CVL-1 contig14332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4710

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--291
20
2.7
20
88
0
72
38
9
16
35
1.81
273--603
51
6.6
50
77
5
337
42
3
16
37
1.67
266--603
101
3.4
100
92
3
563
42
3
16
37
1.66
1288--1429
55
2.6
55
91
0
221
48
6
19
26
1.72
1679--2057
21
17.5
20
71
14
170
53
7
20
18
1.68
1679--1945
64
4.2
63
76
12
176
52
7
20
19
1.69
1714--1899
85
2.2
85
81
9
202
51
6
21
20
1.69
1679--2044
43
8.4
42
74
13
162
53
7
20
18
1.68

Tables:   1

The End!