Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014316.1 Corchorus capsularis cultivar CVL-1 contig14337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60862

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1363--1392
15
1.9
16
93
6
53
46
16
23
13
1.82
8605--8723
58
2.1
58
95
0
211
43
17
21
16
1.88
13936--13965
15
1.9
16
93
6
53
46
16
23
13
1.82
13959--13995
15
2.5
15
86
0
56
40
13
21
24
1.89
17204--17233
11
2.7
11
94
0
51
40
0
20
40
1.52
17204--17263
22
2.9
22
76
19
65
43
3
18
35
1.67
17216--17254
18
2.1
19
90
4
62
46
2
20
30
1.64
18612--18659
20
2.3
20
78
3
51
18
8
8
64
1.46
32077--32137
32
1.9
32
86
6
88
19
21
24
34
1.96
35086--35125
21
1.9
21
100
0
80
10
12
55
22
1.67
43196--43257
26
2.4
26
83
0
70
62
1
29
6
1.29
51842--51887
18
2.6
18
80
19
53
52
2
6
39
1.40
55125--55228
53
2.0
52
90
1
163
29
13
17
39
1.88

Tables:   1

The End!