Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014317.1 Corchorus capsularis cultivar CVL-1 contig14338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23079

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854--1887
8
4.1
8
85
7
50
58
14
2
23
1.50
1966--1991
5
5.2
5
100
0
52
80
0
0
19
0.71
3524--3628
33
3.3
32
80
6
106
35
9
16
39
1.81
4018--4076
30
2.0
30
90
6
93
30
16
30
22
1.96
8223--8325
32
3.2
32
83
0
125
16
7
34
40
1.77
8221--8313
16
5.8
16
68
5
62
17
7
35
39
1.78
9952--10025
39
1.9
37
91
5
121
20
8
24
47
1.77
17049--17095
23
2.0
23
100
0
94
21
4
27
46
1.69

Tables:   1

The End!