Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014320.1 Corchorus capsularis cultivar CVL-1 contig14341, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25763

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1353--1388
18
2.0
18
94
0
63
22
11
25
41
1.86
1865--1906
2
20.0
2
90
9
66
47
4
0
47
1.23
3426--3479
26
2.1
26
86
6
74
31
5
18
44
1.73
12586--12686
53
1.9
52
93
2
175
46
13
10
28
1.77
19330--19361
11
2.9
11
90
0
55
37
0
18
43
1.51
19330--19389
22
2.9
22
76
19
65
41
3
18
36
1.67
19340--19377
19
2.1
18
90
5
58
44
2
21
31
1.66
20723--20753
6
5.3
6
96
3
55
35
0
12
51
1.40

Tables:   1

The End!