Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014324.1 Corchorus capsularis cultivar CVL-1 contig14345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68305

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11362--11499
45
3.1
45
94
0
231
28
8
37
24
1.85
23765--23861
33
3.0
33
95
1
169
28
19
29
21
1.98
32541--32576
19
1.9
18
88
5
54
41
2
22
33
1.68
33857--33890
16
2.2
16
89
5
52
29
2
8
58
1.43
39763--39811
16
3.1
16
77
8
55
40
16
28
14
1.87
42410--42445
19
1.9
18
88
5
54
41
2
22
33
1.68
43723--43756
16
2.2
16
89
5
52
29
2
8
58
1.43
55181--55205
2
12.5
2
100
0
50
52
0
0
48
1.00
56758--56783
5
5.2
5
100
0
52
61
0
0
38
0.96
64518--64617
31
3.3
29
75
13
87
33
14
22
31
1.93
65617--65663
22
2.1
23
88
4
69
57
8
2
31
1.41
65628--65677
22
2.3
22
82
6
57
60
6
2
32
1.32
65641--65679
15
2.6
15
83
0
51
56
5
2
35
1.35

Tables:   1

The End!