Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014326.1 Corchorus capsularis cultivar CVL-1 contig14347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12758

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63--101
17
2.3
17
90
0
60
0
17
5
76
0.96
5758--5786
13
2.1
14
93
6
51
48
10
20
20
1.79
9542--9610
35
2.0
35
100
0
138
11
27
11
49
1.74
10685--10798
57
2.0
57
96
3
212
40
19
3
36
1.69
11269--11368
48
2.1
48
98
0
191
43
24
10
23
1.84
12340--12453
57
2.0
57
94
3
203
41
19
2
36
1.65

Tables:   1

The End!