Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014327.1 Corchorus capsularis cultivar CVL-1 contig14348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43546

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
994--1022
2
15.0
2
92
7
51
51
0
0
48
1.00
9833--10004
35
4.9
35
90
2
265
39
8
18
33
1.80
12859--12898
21
1.9
21
94
0
71
35
20
15
30
1.93
14515--15039
259
2.0
259
90
4
832
31
10
13
45
1.76
14927--15181
127
2.0
127
95
1
458
34
11
8
46
1.70
17552--17596
2
22.5
2
90
0
72
46
2
2
48
1.26
22596--22662
35
1.9
35
96
0
125
49
16
0
34
1.46
22816--22877
30
2.1
30
93
0
106
46
4
1
46
1.33
26868--27031
90
1.8
90
87
0
247
36
6
15
41
1.73
32097--32132
18
2.0
18
88
0
54
33
13
19
33
1.91

Tables:   1

The End!