Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014329.1 Corchorus capsularis cultivar CVL-1 contig14350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41898

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
568--631
27
2.4
27
81
0
65
25
15
28
31
1.96
3115--3252
31
4.5
31
83
3
181
31
23
23
20
1.98
3129--3206
29
2.6
30
87
4
113
37
21
20
20
1.95
4859--4885
6
4.5
6
100
0
54
14
14
51
18
1.76
8543--8569
1
27.0
1
100
0
54
100
0
0
0
0.00
13123--13154
12
2.7
12
95
0
55
46
6
31
15
1.71
14607--14662
17
3.3
17
84
0
76
32
17
21
28
1.96
41227--41314
33
2.7
33
91
3
133
17
39
30
12
1.86
41409--41475
33
2.0
33
94
0
116
13
34
35
16
1.88

Tables:   1

The End!