Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014330.1 Corchorus capsularis cultivar CVL-1 contig14351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32372

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--98
32
3.1
32
88
4
155
14
38
37
9
1.78
5--119
32
3.6
32
87
6
146
12
35
41
10
1.77
42--139
32
3.0
31
82
10
90
11
33
42
12
1.78
6110--6324
109
2.0
108
87
5
312
46
8
9
34
1.68
7069--7127
31
1.9
31
89
0
91
44
3
18
33
1.67
15816--15857
6
7.2
6
91
5
59
80
0
19
0
0.70
16011--16098
44
2.0
44
100
0
176
45
11
22
20
1.83
16141--16267
44
2.9
44
97
0
245
27
11
14
45
1.80

Tables:   1

The End!