Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014332.1 Corchorus capsularis cultivar CVL-1 contig14353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43855

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
366--470
33
3.2
32
80
8
113
24
9
20
44
1.81
486--590
33
3.3
32
80
6
106
35
9
16
39
1.81
6521--6627
33
3.2
32
78
5
99
11
27
37
24
1.89
11876--11927
22
2.4
22
86
0
68
28
17
30
23
1.97
12344--12405
27
2.3
27
94
0
106
17
40
20
20
1.92
14354--14416
21
3.0
21
68
13
67
30
9
34
25
1.88
14353--14434
41
2.0
41
95
0
146
30
12
34
23
1.91
14353--14412
20
3.0
20
69
11
59
28
8
38
25
1.84
18222--18274
21
2.5
21
85
14
74
30
32
30
7
1.85
25543--25595
21
2.6
21
87
3
72
28
32
32
7
1.85
27729--27770
22
1.9
22
85
9
59
45
4
4
45
1.45
32236--32269
11
3.2
10
84
15
50
50
17
2
29
1.61
39319--39352
11
3.2
10
84
15
50
50
17
2
29
1.61

Tables:   1

The End!