Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014333.1 Corchorus capsularis cultivar CVL-1 contig14354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57702

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
500--550
21
2.4
21
93
0
93
29
45
21
3
1.70
648--675
13
2.2
13
100
0
56
21
46
17
14
1.84
15834--15974
65
2.1
66
89
6
223
50
14
19
16
1.78
15963--16010
1
48.0
1
95
0
87
97
0
0
2
0.15
17157--17252
51
1.9
51
86
2
140
39
25
9
26
1.85
19785--19888
37
2.8
37
97
0
199
53
4
17
24
1.62
19790--19891
21
5.3
21
60
29
57
54
4
14
25
1.60
39283--39343
23
2.7
22
76
16
61
47
26
9
16
1.77
44119--44200
28
2.9
28
92
1
128
36
35
13
14
1.86
44536--44589
28
1.9
28
88
0
81
12
25
25
35
1.92
47095--47162
21
3.2
21
72
0
73
35
25
11
27
1.91
52874--53379
253
2.0
255
97
0
962
30
14
11
43
1.80
53323--53470
40
3.6
41
89
4
210
33
16
8
40
1.80
57251--57295
21
2.1
22
84
12
58
17
35
8
37
1.81

Tables:   1

The End!