Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014338.1 Corchorus capsularis cultivar CVL-1 contig14359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46395

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2328--2407
23
3.6
22
70
24
60
30
0
1
68
0.97
4166--4213
21
2.3
21
88
0
69
10
35
29
25
1.89
4174--4219
21
2.2
21
96
0
83
6
32
30
30
1.83
9648--9678
8
3.9
8
95
0
53
12
0
0
87
0.55
10706--10739
10
3.0
12
83
16
54
5
26
41
26
1.78
10743--10790
21
2.3
21
85
0
60
12
35
27
25
1.92
10753--10793
21
2.0
21
95
0
73
7
34
26
31
1.84
15005--15054
21
2.4
20
90
9
82
16
8
14
62
1.54
25644--25680
19
2.0
18
89
5
56
40
8
21
29
1.82
31598--31777
89
2.0
88
94
1
315
41
28
7
22
1.81
40486--40541
21
2.6
21
91
2
94
14
17
46
21
1.84
45962--45987
10
2.6
10
100
0
52
19
0
0
80
0.71

Tables:   1

The End!