Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014343.1 Corchorus capsularis cultivar CVL-1 contig14364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56281

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--613
2
12.5
2
100
0
50
0
0
48
52
1.00
2266--2402
67
2.0
68
87
1
195
6
21
19
52
1.68
7060--7134
33
2.3
33
88
4
116
18
42
26
12
1.85
7113--7196
33
2.6
32
81
5
105
16
42
29
10
1.82
7276--7362
33
2.6
34
85
3
115
11
36
36
14
1.83
7644--7681
16
2.6
14
84
15
58
21
7
34
36
1.82
7649--7680
16
2.0
16
100
0
64
18
6
37
37
1.76
15638--15662
2
12.5
2
100
0
50
48
0
0
52
1.00
19180--19284
33
3.2
33
78
5
86
42
20
9
26
1.83
36724--36830
33
3.2
33
80
5
119
24
38
28
9
1.86
52171--52201
16
1.9
16
93
0
53
38
9
32
19
1.84
55774--55846
29
2.4
30
79
4
85
42
1
2
53
1.23

Tables:   1

The End!