Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014346.1 Corchorus capsularis cultivar CVL-1 contig14367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4491

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1642--1910
32
8.1
32
80
11
267
52
3
24
19
1.63
1898--1971
38
1.9
38
83
5
96
50
4
24
21
1.66
2003--2270
36
7.5
35
88
4
333
54
2
22
20
1.57
2036--2249
7
29.7
7
71
16
84
54
2
21
21
1.56
2003--2270
72
3.7
71
87
5
371
54
2
22
20
1.57
2003--2270
108
2.5
108
88
3
380
54
2
22
20
1.57
2196--2282
29
3.0
28
76
14
88
52
2
21
22
1.58
2232--2276
21
2.1
21
83
0
54
48
2
22
26
1.62
2261--2533
27
10.7
26
80
13
202
55
3
19
21
1.58
2261--2452
55
3.6
54
82
12
207
56
3
19
20
1.56
2261--2510
55
4.8
52
79
14
200
56
3
19
20
1.57
2331--2538
22
8.5
23
79
11
116
57
3
19
20
1.55
2527--2629
42
2.5
41
87
4
161
50
4
22
22
1.68
2527--2629
21
5.0
21
84
4
138
50
4
22
22
1.68

Tables:   1

The End!