Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014362.1 Corchorus capsularis cultivar CVL-1 contig14383, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45115

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1255--1301
24
2.0
24
86
0
67
23
12
8
55
1.64
6538--6564
14
1.9
14
100
0
54
29
22
0
48
1.51
6550--6853
35
8.7
34
88
3
410
33
17
8
40
1.80
16260--16622
156
2.3
155
78
9
355
34
19
14
30
1.92
29986--30013
13
2.2
13
100
0
56
39
14
14
32
1.86
30139--30381
121
2.0
120
90
0
378
27
16
20
35
1.94
34380--34421
20
2.1
20
86
0
57
57
7
4
30
1.47
35457--35512
22
2.5
22
100
0
112
7
44
39
8
1.63
39752--39781
6
4.8
6
95
4
51
33
30
16
20
1.94
42134--42171
11
3.5
11
89
10
51
39
0
2
57
1.12
42550--42599
2
24.0
2
84
8
64
46
6
0
48
1.27
44858--44900
11
3.9
11
90
0
68
46
6
4
41
1.51
44854--44900
22
2.1
22
96
0
85
46
6
4
42
1.48
44948--44975
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!