Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014367.1 Corchorus capsularis cultivar CVL-1 contig14388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74907

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15803--15862
31
1.9
31
86
6
86
55
15
13
16
1.70
21916--22098
79
2.3
79
99
0
357
30
22
24
22
1.99
23057--23098
19
2.3
18
84
8
57
35
2
0
61
1.09
29258--29286
14
2.1
14
100
0
58
62
13
0
24
1.32
34987--35022
17
2.1
17
100
0
72
38
0
5
55
1.23
53118--53160
3
14.0
3
81
13
52
65
4
2
27
1.25
62736--62819
29
2.9
30
85
5
118
36
9
28
25
1.87
70303--70356
25
2.2
25
77
9
58
24
11
20
44
1.83

Tables:   1

The End!