Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014370.1 Corchorus capsularis cultivar CVL-1 contig14391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12753

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
1
27.0
1
100
0
54
100
0
0
0
0.00
469--498
12
2.5
12
94
0
51
0
10
0
90
0.47
469--498
16
1.9
15
93
6
51
0
10
0
90
0.47
1028--1062
14
2.5
14
90
9
54
80
2
17
0
0.84
1168--1236
33
2.1
33
83
5
86
11
43
37
7
1.69
2732--2768
18
2.0
19
89
5
58
32
5
2
59
1.34
6090--6155
8
7.9
8
76
20
64
46
24
3
25
1.66
6092--6155
27
2.5
24
81
18
69
45
25
3
26
1.68

Tables:   1

The End!