Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014382.1 Corchorus capsularis cultivar CVL-1 contig14403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49928

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20580--20622
10
4.7
9
83
11
52
46
0
2
51
1.13
26500--26910
69
6.0
69
88
2
535
36
11
26
25
1.90
28634--28694
7
9.0
7
78
10
56
52
39
1
6
1.37
28620--28666
21
2.2
21
92
3
76
59
27
4
8
1.45
28620--28666
14
3.3
14
84
3
58
59
27
4
8
1.45
42897--42970
33
2.2
33
90
0
112
16
29
36
17
1.92

Tables:   1

The End!