Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014386.1 Corchorus capsularis cultivar CVL-1 contig14407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22478

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--37
2
17.0
2
100
0
68
50
0
0
50
1.00
1963--2021
31
1.9
31
96
0
109
18
25
22
33
1.96
2032--2107
30
2.5
31
77
10
84
18
26
21
34
1.96
3454--3484
3
10.3
3
100
0
62
64
0
0
35
0.94
6799--6851
25
2.1
24
82
10
61
52
20
1
24
1.56
6922--6946
7
3.6
7
100
0
50
12
48
24
16
1.79
10344--10673
178
1.9
178
88
2
502
34
15
14
35
1.88
20557--20600
21
2.1
21
83
8
54
18
31
9
40
1.81
20745--20812
26
2.6
26
90
0
109
54
10
1
33
1.43
20745--20862
52
2.4
51
79
13
122
54
10
1
33
1.44
20867--20893
10
2.7
10
100
0
54
85
0
0
14
0.61

Tables:   1

The End!