Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014394.1 Corchorus capsularis cultivar CVL-1 contig14415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47585

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4076--4107
15
2.1
15
94
0
55
6
25
0
68
1.12
6526--6552
2
13.5
2
100
0
54
51
0
0
48
1.00
16495--16601
54
2.1
51
84
10
137
25
29
6
38
1.81
17408--17446
20
2.0
20
100
0
78
25
15
28
30
1.96
17940--17967
14
2.0
14
100
0
56
35
7
14
42
1.73
17954--18226
138
2.0
137
97
0
519
38
13
15
31
1.87
18525--18622
51
1.9
51
85
4
135
34
17
18
29
1.94
18663--18689
2
13.5
2
100
0
54
48
0
0
51
1.00
19011--19109
40
2.4
41
96
3
182
15
10
10
64
1.49
28612--28826
109
2.0
108
89
5
328
33
10
8
47
1.68
28883--28919
17
2.2
17
95
0
65
43
0
10
45
1.39
36913--36972
22
2.8
22
71
14
54
23
13
31
31
1.93
46387--46433
3
16.0
3
91
4
69
36
0
0
63
0.94
47091--47133
20
2.1
21
86
4
61
18
39
6
34
1.78

Tables:   1

The End!