Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014404.1 Corchorus capsularis cultivar CVL-1 contig14425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4917

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3645--4185
22
24.7
22
67
13
147
36
14
9
39
1.78
3918--4185
44
6.2
42
71
15
174
35
14
9
39
1.79
3954--4038
23
3.7
23
80
1
91
38
14
5
41
1.70
4176--4242
19
3.5
19
83
2
89
23
23
10
41
1.85
4321--4471
44
3.4
44
72
5
117
35
13
9
41
1.77
4456--4519
21
2.8
23
83
11
78
35
9
7
46
1.65
4390--4700
22
13.9
22
68
18
112
35
15
9
39
1.80
4592--4715
22
5.5
22
71
10
72
35
18
10
35
1.85
4754--4915
22
7.3
22
82
7
98
38
19
10
31
1.86
4808--4892
22
3.9
22
95
0
143
35
16
14
34
1.89
4754--4892
44
3.1
44
80
10
147
38
19
10
31
1.86
4808--4915
22
4.9
22
89
2
110
36
17
12
33
1.88
4754--4915
44
3.6
44
77
11
116
38
19
10
31
1.86

Tables:   1

The End!