Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014411.1 Corchorus capsularis cultivar CVL-1 contig14432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55945

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
312--343
2
16.5
2
93
6
57
46
0
0
53
1.00
1538--1643
30
3.4
30
75
7
95
20
23
23
32
1.98
3511--3548
19
2.0
20
84
5
51
71
5
13
10
1.30
5907--5939
2
16.5
2
100
0
66
48
0
0
51
1.00
18595--18638
6
7.8
6
90
10
67
84
0
15
0
0.63
18596--18641
5
8.8
5
90
9
58
84
0
15
0
0.62
18596--18638
11
3.9
11
88
11
70
83
0
16
0
0.64
18595--18670
17
4.3
17
79
14
82
80
6
13
0
0.90
18969--19012
2
22.0
2
90
0
70
0
45
0
54
0.99
42307--42347
22
1.9
21
85
5
55
2
24
0
73
0.96
51653--51690
15
2.5
15
100
0
76
60
5
13
21
1.52
53150--53178
13
2.2
13
100
0
58
27
6
6
58
1.50
54024--54061
11
3.5
11
89
10
51
39
0
2
57
1.12

Tables:   1

The End!