Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014415.1 Corchorus capsularis cultivar CVL-1 contig14436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30934

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
942--1080
42
3.1
44
83
11
185
15
5
25
53
1.64
4802--4879
31
2.5
31
85
4
104
17
24
30
26
1.97
5835--5871
12
3.2
11
88
11
56
86
2
10
0
0.67
5906--5959
27
2.0
27
82
3
65
50
5
20
24
1.69
8299--8328
2
15.0
2
100
0
60
50
0
0
50
1.00
10671--10701
15
2.1
15
93
0
53
48
32
9
9
1.69
13466--13691
124
1.8
123
87
2
319
32
12
17
36
1.88

Tables:   1

The End!