Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014443.1 Corchorus capsularis cultivar CVL-1 contig14464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33727

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3366--3447
42
2.0
42
90
9
134
21
12
9
56
1.65
6368--6405
1
38.0
1
94
0
67
97
0
2
0
0.18
19367--19407
21
2.0
21
85
9
57
56
4
14
24
1.58
26519--26583
32
2.0
32
96
0
121
13
6
16
63
1.50
33119--33195
19
3.9
21
67
13
56
22
10
7
59
1.55
33135--33195
20
3.1
20
66
4
61
22
9
8
59
1.56
33135--33192
18
3.0
20
70
14
50
24
10
6
58
1.55
33429--33456
10
2.8
10
100
0
56
14
0
0
85
0.59

Tables:   1

The End!