Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014449.1 Corchorus capsularis cultivar CVL-1 contig14470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38106

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1675--2468
333
2.4
329
80
5
808
35
13
14
36
1.86
2146--2738
318
1.9
315
79
9
668
35
12
14
36
1.85
3834--3927
47
2.0
47
89
0
143
40
11
23
24
1.88
7854--7895
22
1.9
22
95
0
75
21
16
23
38
1.93
12449--12503
26
2.1
26
93
0
92
40
5
32
21
1.76
15734--15765
3
10.7
3
93
0
55
62
0
37
0
0.95
17669--17710
21
2.0
21
90
0
66
28
14
11
45
1.80
20412--20514
50
2.1
50
92
0
170
27
9
23
39
1.86
28555--28616
32
2.0
30
87
6
88
37
3
1
58
1.24
33720--33773
28
1.9
28
84
0
72
24
3
12
59
1.50
34039--34077
17
2.3
18
91
8
64
25
10
0
64
1.25
37737--37808
29
2.4
30
79
4
83
41
26
9
22
1.84

Tables:   1

The End!