Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014458.1 Corchorus capsularis cultivar CVL-1 contig14479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84999

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
562--610
2
24.5
2
87
0
71
53
0
0
46
1.00
993--1030
11
3.5
11
85
10
51
57
0
2
39
1.12
5692--5720
2
14.5
2
100
0
58
48
0
0
51
1.00
17789--17813
12
2.1
12
100
0
50
52
0
16
32
1.44
26177--26223
21
2.2
21
88
0
67
29
12
48
8
1.71
48448--48476
1
29.0
1
100
0
58
0
0
0
100
0.00
48992--49040
22
2.2
21
79
10
53
22
18
36
22
1.95
53905--53957
15
3.2
17
79
17
58
52
20
5
20
1.66
60452--60507
27
2.1
27
93
0
94
21
10
16
51
1.74
67490--67535
7
6.7
7
90
9
53
86
0
13
0
0.56
67490--67535
17
2.7
17
100
0
92
86
0
13
0
0.56
67495--67534
10
4.3
10
81
18
59
90
0
10
0
0.47
77576--77606
16
1.9
16
93
0
53
19
19
19
41
1.90

Tables:   1

The End!