Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014461.1 Corchorus capsularis cultivar CVL-1 contig14482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39212

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--227
40
1.9
40
86
5
111
41
12
12
32
1.82
17122--17151
11
2.7
11
94
0
51
43
0
23
33
1.54
25954--26003
23
2.2
23
100
0
100
42
32
10
16
1.81
30206--30240
14
2.5
14
95
0
61
37
14
20
28
1.91
35736--35779
21
2.1
21
100
0
88
29
4
36
29
1.77

Tables:   1

The End!