Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014464.1 Corchorus capsularis cultivar CVL-1 contig14485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10562

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1834--1874
20
2.0
20
85
0
55
58
21
4
14
1.55
4155--4192
19
1.9
19
89
5
58
50
7
13
28
1.69
7846--7907
4
15.5
4
89
0
79
50
8
0
41
1.32
7846--7907
6
10.3
6
85
0
79
50
8
0
41
1.32
7849--7907
10
5.9
10
89
0
82
50
8
0
40
1.33

Tables:   1

The End!