Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014466.1 Corchorus capsularis cultivar CVL-1 contig14487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30832

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
272--869
325
1.8
326
80
3
727
36
15
14
32
1.88
6057--11586
658
8.4
650
79
8
4748
35
16
14
33
1.89
6216--11586
336
16.2
330
76
8
4357
35
16
14
32
1.89
11536--11735
108
1.9
108
87
2
294
34
16
17
31
1.92
11644--13666
324
6.2
320
75
9
1697
35
17
14
32
1.90
11644--13674
648
3.1
642
84
4
2483
35
17
14
32
1.90
15680--16079
51
7.5
51
77
14
387
34
24
33
7
1.84
15741--15912
61
2.7
61
88
7
236
34
24
34
6
1.82
15693--16128
224
2.0
215
86
6
615
34
24
33
8
1.84
16666--16752
45
1.9
45
80
0
102
32
18
25
24
1.97
19436--19550
38
3.2
37
66
16
96
60
7
21
10
1.55
19423--19578
71
2.2
71
96
0
285
55
8
23
13
1.65
23989--24031
20
2.1
21
86
4
61
48
16
6
27
1.71
30298--30331
11
3.1
11
95
0
59
85
0
14
0
0.60

Tables:   1

The End!