Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014472.1 Corchorus capsularis cultivar CVL-1 contig14493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10968

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
178--245
26
2.6
26
92
0
109
35
1
10
52
1.44
255--313
25
2.4
25
91
5
95
40
0
23
35
1.55
384--425
20
2.1
20
90
0
66
33
9
38
19
1.84
681--738
9
5.9
10
77
22
61
39
0
1
58
1.08
681--740
13
4.6
14
84
12
67
40
0
1
58
1.08
696--735
2
21.5
2
80
14
50
42
0
2
55
1.13
681--738
20
3.0
20
83
16
77
39
0
1
58
1.08
3655--3701
19
2.5
19
79
6
51
19
8
8
63
1.48
4661--4780
59
2.0
61
93
4
208
43
13
24
19
1.86
4849--4928
23
3.3
23
80
10
106
18
8
8
63
1.48
7155--7196
17
2.5
16
85
11
57
23
23
21
30
1.99
10924--10968
2
22.0
2
95
4
81
48
2
0
48
1.13

Tables:   1

The End!