Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014473.1 Corchorus capsularis cultivar CVL-1 contig14494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39657

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1171--1276
51
2.1
51
89
5
160
30
18
4
46
1.70
5039--5119
40
2.0
40
100
0
162
38
17
14
29
1.90
5056--5135
20
4.0
20
71
14
74
33
20
18
27
1.96
7774--7882
57
1.9
58
90
1
175
34
15
4
44
1.67
23209--23265
19
2.9
19
85
10
78
36
19
7
36
1.79
31161--31314
31
5.0
31
80
0
164
18
20
24
36
1.95
31483--31511
2
15.0
2
92
7
51
48
0
0
51
1.00
32270--32499
70
3.1
70
80
12
280
48
0
13
38
1.42
32264--32498
81
3.1
78
86
9
326
49
0
12
37
1.41
32593--32635
6
7.3
6
94
5
79
48
0
16
34
1.46

Tables:   1

The End!