Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014474.1 Corchorus capsularis cultivar CVL-1 contig14495, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33811

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13089--13135
4
11.8
4
100
0
94
51
23
0
25
1.49
14461--14530
29
2.4
29
85
2
86
37
28
14
20
1.91
17072--17096
7
3.6
7
100
0
50
0
0
12
88
0.53
18510--18538
15
1.9
15
100
0
58
68
0
0
31
0.89
32940--32964
1
25.0
1
100
0
50
100
0
0
0
0.00
33610--33651
21
2.0
21
85
0
57
19
40
9
30
1.83

Tables:   1

The End!