Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014477.1 Corchorus capsularis cultivar CVL-1 contig14498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42985

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7491--7569
39
2.0
39
95
0
140
32
20
8
37
1.83
8268--8300
16
1.9
18
88
11
52
36
3
0
60
1.12
8989--9050
21
3.0
20
81
9
81
30
22
11
35
1.89
9703--9746
19
2.2
20
84
11
56
29
4
6
59
1.44
13111--13170
24
2.5
23
82
17
70
28
8
1
61
1.34
13249--13281
11
2.8
12
90
9
50
30
0
0
69
0.88
13325--13358
17
1.9
18
88
5
52
55
0
11
32
1.36
13348--13383
15
2.4
15
95
0
63
72
0
2
25
0.98
37761--41278
335
10.7
332
78
7
3135
32
15
16
35
1.90
41278--42985
337
5.1
333
82
5
2054
30
15
17
36
1.91
41278--42985
668
2.6
664
88
2
2516
30
15
17
36
1.91

Tables:   1

The End!