Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014480.1 Corchorus capsularis cultivar CVL-1 contig14501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68978

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3515--3566
16
3.2
16
75
2
50
5
23
1
69
1.20
16334--16359
7
3.7
7
100
0
52
88
0
11
0
0.52
34545--34610
31
2.1
31
88
0
96
30
18
6
45
1.73
34923--34995
38
1.9
38
85
0
101
42
8
13
35
1.74
34902--35017
60
1.9
60
82
3
144
41
6
14
37
1.73
34883--35315
22
19.8
22
65
16
141
39
10
14
35
1.80
35281--35432
62
2.5
62
92
0
250
42
8
13
34
1.75
35280--35388
22
5.1
22
66
22
63
44
9
14
32
1.77
65282--65329
24
2.0
24
100
0
96
62
4
8
25
1.41
65286--65327
13
3.4
13
74
12
52
59
2
9
28
1.41
65475--65522
21
2.3
20
92
3
78
27
16
0
56
1.41
66822--67329
66
7.7
66
80
1
415
22
25
26
26
2.00
66951--67329
135
2.8
132
83
2
454
22
25
26
25
2.00
67271--67411
66
2.1
66
81
2
158
19
31
21
27
1.98
66954--67329
132
2.8
134
83
2
463
23
25
26
25
2.00
66954--67387
132
3.3
132
80
2
361
22
26
25
25
2.00

Tables:   1

The End!