Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014483.1 Corchorus capsularis cultivar CVL-1 contig14504, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68424

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
567--595
2
14.5
2
100
0
58
51
0
0
48
1.00
650--693
21
2.1
21
86
0
61
22
27
11
38
1.88
692--738
14
3.1
15
77
17
51
17
25
4
53
1.62
739--835
33
3.0
31
81
6
86
14
40
32
12
1.83
6154--6210
29
2.0
29
82
0
69
24
10
17
47
1.79
6580--6614
2
17.5
2
100
0
70
0
51
0
48
1.00
33037--33082
2
23.0
2
90
0
74
50
4
0
45
1.21
33029--33075
22
2.1
22
100
0
94
51
8
0
40
1.33
38877--38918
17
2.3
19
84
16
70
14
35
33
16
1.89
38882--38922
17
2.4
17
100
0
82
17
39
29
14
1.89
54710--54746
3
12.3
3
100
0
74
67
0
0
32
0.91
55570--55612
20
2.1
21
86
4
61
53
11
9
25
1.67
56147--56190
23
1.9
23
85
0
61
4
18
9
68
1.34
67317--67347
2
16.0
2
93
6
55
51
0
0
48
1.00
67319--67344
13
2.0
13
100
0
52
53
0
0
46
1.00
67317--67346
15
2.0
15
100
0
60
53
0
0
46
1.00

Tables:   1

The End!