Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014486.1 Corchorus capsularis cultivar CVL-1 contig14507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46132

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5046--5271
115
2.0
113
91
3
364
30
17
16
35
1.92
5306--5891
294
2.0
293
87
1
841
31
16
18
34
1.92
5600--6531
326
2.8
318
75
8
873
33
14
16
35
1.89
14528--14654
63
2.0
63
93
3
220
29
24
14
32
1.94
16608--16652
22
2.1
22
83
4
56
33
8
8
48
1.65
34654--34694
18
2.3
19
84
12
52
12
29
0
58
1.34
37717--37762
23
2.0
23
83
8
58
54
0
4
41
1.20
43664--43712
1
49.0
1
83
0
53
89
0
6
4
0.57
45962--46059
31
3.2
31
86
1
99
18
20
27
33
1.96

Tables:   1

The End!