Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01014488.1 Corchorus capsularis cultivar CVL-1 contig14509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 14861
ACGTcount: A:0.33, C:0.17, G:0.16, T:0.34
Found at i:100 original size:22 final size:22
Alignment explanation
Indices: 75--267 Score: 70
Period size: 22 Copynumber: 8.8 Consensus size: 22
65 TGATCCCATC
75 ATGAAATTTTGATAACCTTCCT
1 ATGAAATTTTGATAACCTTCCT
* ** *
97 ATGAAATTTTAATAACAATACT
1 ATGAAATTTTGATAACCTTCCT
* ** * * **
119 ATGGAATTTCAAGAATCTTTTT
1 ATGAAATTTTGATAACCTTCCT
** ** * *
141 AT-ATGTTTTTTTAACTTTCTT
1 ATGAAATTTTGATAACCTTCCT
* *
162 ATGAAATTTTGTTAACCTCCCT
1 ATGAAATTTTGATAACCTTCCT
* * *
184 AAGGAATTTTGA-AGACC-TCAAT
1 ATGAAATTTTGATA-ACCTTC-CT
**
206 ATGAAATTTTGATAACCAACACT
1 ATGAAATTTTGATAACCTTC-CT
* *
229 ATGAGATGTTGATAACC-TCCAT
1 ATGAAATTTTGATAACCTTCC-T
* *
251 ATGATATATTGATAACC
1 ATGAAATTTTGATAACC
268 ACTTTATAAG
Statistics
Matches: 123, Mismatches: 42, Indels: 12
0.69 0.24 0.07
Matches are distributed among these distances:
21 14 0.11
22 90 0.73
23 19 0.15
ACGTcount: A:0.35, C:0.15, G:0.11, T:0.39
Consensus pattern (22 bp):
ATGAAATTTTGATAACCTTCCT
Found at i:240 original size:23 final size:22
Alignment explanation
Indices: 204--268 Score: 67
Period size: 23 Copynumber: 2.9 Consensus size: 22
194 GAAGACCTCA
*
204 ATATGAAATTTTGATAACCAAC
1 ATATGAAATATTGATAACCAAC
* * **
226 ACTATGAGATGTTGATAACCTCC
1 A-TATGAAATATTGATAACCAAC
*
249 ATATGATATATTGATAACCA
1 ATATGAAATATTGATAACCA
269 CTTTATAAGA
Statistics
Matches: 35, Mismatches: 7, Indels: 2
0.80 0.16 0.05
Matches are distributed among these distances:
22 17 0.49
23 18 0.51
ACGTcount: A:0.40, C:0.15, G:0.12, T:0.32
Consensus pattern (22 bp):
ATATGAAATATTGATAACCAAC
Found at i:373 original size:22 final size:21
Alignment explanation
Indices: 161--594 Score: 168
Period size: 22 Copynumber: 20.0 Consensus size: 21
151 TTAACTTTCT
*
161 TATGAAATTTTGTTAACCTCCC
1 TATGAAATTTTGATAACCT-CC
* * *
183 TAAGGAATTTTGA-AGACCTCAA
1 TATGAAATTTTGATA-ACCTC-C
*
205 TATGAAATTTTGATAACCAACAC
1 TATGAAATTTTGATAACC-TC-C
* *
228 TATGAGATGTTGATAACCTCC
1 TATGAAATTTTGATAACCTCC
* * * *
249 ATATGATATATTGATAACCACTT
1 -TATGAAATTTTGATAACCTC-C
* * *
272 TAT-AAGAATTTAAAAACCTCC
1 TATGAA-ATTTTGATAACCTCC
* *
293 ATATG-AATTGTT-AGTAATCACAC
1 -TATGAAATT-TTGA-TAACCTC-C
* * * * *
316 TTTAAAATTTTGACAATCACAC
1 TATGAAATTTTGATAACCTC-C
*
338 TATGAAATTGTGATAACCTCGC
1 TATGAAATTTTGATAACCTC-C
*
360 TATGAAATTTTGATAAATCTTCC
1 TATGAAATTTTGAT-AA-CCTCC
* *
383 TATAAAATTTTAATAAACCTCCC
1 TATGAAATTTTGAT-AACCT-CC
* * * *
406 AATAAAATTTTGATAACTTTCT
1 TATGAAATTTTGATAAC-CTCC
*
428 TATGAAATCTTGATAA----C
1 TATGAAATTTTGATAACCTCC
* *
445 TA-CAAATTTTGATAAGCTCCC
1 TATGAAATTTTGATAACCT-CC
** * *
466 TATGATTTTTTGATTACCTCAT
1 TATGAAATTTTGATAACCTC-C
* *
488 TATGAAATTTTG-TTATCTCCC
1 TATGAAATTTTGATAACCT-CC
* * *
509 TATGAAATTTTGATCTACATAC
1 TATGAAATTTTGAT-AACCTCC
*
531 TATGAAATTTTGATAACCCTCT
1 TATGAAATTTTGATAA-CCTCC
* *
553 TATGAAAATTTGATAACCTTCA
1 TATGAAATTTTGATAACC-TCC
*
575 TATGAAATTTTGATATCCTC
1 TATGAAATTTTGATAACCTC
595 ACTGAATTTC
Statistics
Matches: 310, Mismatches: 72, Indels: 61
0.70 0.16 0.14
Matches are distributed among these distances:
16 11 0.04
17 2 0.01
21 33 0.11
22 200 0.65
23 61 0.20
24 3 0.01
ACGTcount: A:0.36, C:0.16, G:0.10, T:0.38
Consensus pattern (21 bp):
TATGAAATTTTGATAACCTCC
Found at i:390 original size:23 final size:23
Alignment explanation
Indices: 359--443 Score: 82
Period size: 23 Copynumber: 3.7 Consensus size: 23
349 GATAACCTCG
*
359 CTATGAAATTTTGATAAATCTTC
1 CTATAAAATTTTGATAAATCTTC
* * *
382 CTATAAAATTTTAATAAACCTCC
1 CTATAAAATTTTGATAAATCTTC
* *
405 CAATAAAATTTTGATAACT-TTC
1 CTATAAAATTTTGATAAATCTTC
* * *
427 TTATGAAATCTTGATAA
1 CTATAAAATTTTGATAA
444 CTACAAATTT
Statistics
Matches: 49, Mismatches: 13, Indels: 1
0.78 0.21 0.02
Matches are distributed among these distances:
22 15 0.31
23 34 0.69
ACGTcount: A:0.40, C:0.14, G:0.06, T:0.40
Consensus pattern (23 bp):
CTATAAAATTTTGATAAATCTTC
Found at i:511 original size:43 final size:43
Alignment explanation
Indices: 461--542 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
451 TTTTGATAAG
** * *
461 CTCCCTATGATTTTTTGAT-TACCTCATTATGAAATTTTGTTAT
1 CTCCCTATGAAATTTTGATCTACAT-ACTATGAAATTTTGTTAT
504 CTCCCTATGAAATTTTGATCTACATACTATGAAATTTTG
1 CTCCCTATGAAATTTTGATCTACATACTATGAAATTTTG
543 ATAACCCTCT
Statistics
Matches: 34, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
43 30 0.88
44 4 0.12
ACGTcount: A:0.27, C:0.17, G:0.10, T:0.46
Consensus pattern (43 bp):
CTCCCTATGAAATTTTGATCTACATACTATGAAATTTTGTTAT
Found at i:643 original size:20 final size:19
Alignment explanation
Indices: 580--646 Score: 98
Period size: 19 Copynumber: 3.5 Consensus size: 19
570 CTTCATATGA
*
580 AATTTTGATATCCTCACTG
1 AATTTTGATATCCTCCCTG
*
599 AATTTCGATATCCTCCCTG
1 AATTTTGATATCCTCCCTG
*
618 AATTTTGGTATCCTCCCTG
1 AATTTTGATATCCTCCCTG
637 AAATTTTGAT
1 -AATTTTGAT
647 TACTACATCA
Statistics
Matches: 42, Mismatches: 5, Indels: 1
0.88 0.10 0.02
Matches are distributed among these distances:
19 34 0.81
20 8 0.19
ACGTcount: A:0.24, C:0.22, G:0.12, T:0.42
Consensus pattern (19 bp):
AATTTTGATATCCTCCCTG
Found at i:785 original size:22 final size:22
Alignment explanation
Indices: 758--997 Score: 120
Period size: 22 Copynumber: 11.0 Consensus size: 22
748 ATTTTAAAAA
758 TTTGATAACCTCTTTATGAAAT
1 TTTGATAACCTCTTTATGAAAT
* *
780 TTTGATAACATCTTTATAAAAT
1 TTTGATAACCTCTTTATGAAAT
* * * *
802 TTTGTTGACCCCTCTATGAAAT
1 TTTGATAACCTCTTTATGAAAT
* * * * * *
824 TTTGAAAATCACATTAT-TATT
1 TTTGATAACCTCTTTATGAAAT
*
845 TTTGATAACCTCGCTT-TGAAAT
1 TTTGATAACCTC-TTTATGAAAT
** **
867 TTTGATAACAACACTATGAAAT
1 TTTGATAACCTCTTTATGAAAT
*
889 TTTGATAA--TATTCATAT-AAAT
1 TTTGATAACCTCTT--TATGAAAT
910 TTTGATAATCCTATCTTTATGAAAT
1 TTTGATAA-CC--TCTTTATGAAAT
* * * * *
935 TTCGATAATCACTCTATGAGA-
1 TTTGATAACCTCTTTATGAAAT
* *
956 TTTGATAACCT-TCTATCAAAT
1 TTTGATAACCTCTTTATGAAAT
* *
977 TTTGGT-A-CTCATTATGAAAT
1 TTTGATAACCTCTTTATGAAAT
997 T
1 T
998 GAGACTTTTA
Statistics
Matches: 159, Mismatches: 46, Indels: 28
0.68 0.20 0.12
Matches are distributed among these distances:
19 2 0.01
20 16 0.10
21 38 0.24
22 85 0.53
24 4 0.03
25 11 0.07
26 3 0.02
ACGTcount: A:0.34, C:0.14, G:0.09, T:0.43
Consensus pattern (22 bp):
TTTGATAACCTCTTTATGAAAT
Found at i:800 original size:44 final size:44
Alignment explanation
Indices: 727--997 Score: 138
Period size: 44 Copynumber: 6.2 Consensus size: 44
717 AGAAATACCA
*
727 TTATGAAATTTTTG-TAATCACATTT-TAAAAATTTGATAACCTCT
1 TTATGAAA-TTTTGATAATCAC-TTTATAAAATTTTGATAACCTCT
* * *
771 TTATGAAATTTTGATAA-CATCTTTATAAAATTTTGTTGACCCCT
1 TTATGAAATTTTGATAATCA-CTTTATAAAATTTTGATAACCTCT
* * * * * *
815 CTATGAAATTTTGAAAATCACATTAT-TATTTTTGATAACCTCGC
1 TTATGAAATTTTGATAATCACTTTATAAAATTTTGATAACCTC-T
** * *
859 TT-TGAAATTTTGATAA-CAACACTATGAAATTTTGATAA--TAT
1 TTATGAAATTTTGATAATC-ACTTTATAAAATTTTGATAACCTCT
* * * *
900 TCATAT-AAATTTTGATAATCCTATCTTTATGAAATTTCGATAATCACT
1 T--TATGAAATTTTGATAAT-C-A-CTTTATAAAATTTTGATAACCTCT
* * * * *
948 CTATGAGA-TTTGATAA-C-CTTCTATCAAATTTTGGT-A-CTCA
1 TTATGAAATTTTGATAATCACTT-TATAAAATTTTGATAACCTCT
988 TTATGAAATT
1 TTATGAAATT
998 GAGACTTTTA
Statistics
Matches: 174, Mismatches: 35, Indels: 39
0.70 0.14 0.16
Matches are distributed among these distances:
40 8 0.05
41 6 0.03
42 13 0.07
43 53 0.30
44 60 0.34
45 4 0.02
46 27 0.16
47 2 0.01
48 1 0.01
ACGTcount: A:0.35, C:0.13, G:0.09, T:0.43
Consensus pattern (44 bp):
TTATGAAATTTTGATAATCACTTTATAAAATTTTGATAACCTCT
Found at i:1032 original size:22 final size:22
Alignment explanation
Indices: 844--1125 Score: 92
Period size: 22 Copynumber: 12.5 Consensus size: 22
834 ACATTATTAT
* *
844 TTTTGATAACC-TCGCTTTGAAA
1 TTTTGATAACCTTC-ATATGAAA
**
866 TTTTGATAA-CAACACTATGAAA
1 TTTTGATAACCTTCA-TATGAAA
**
888 TTTTGATAATATTCATAT-AAA
1 TTTTGATAACCTTCATATGAAA
*
909 TTTTGATAATCCTATCTTTATGAAA
1 TTTTGATAA-CCT-TC-ATATGAAA
* *
934 TTTCGATAATCAC-TC-TATGAGA
1 TTTTGATAA-C-CTTCATATGAAA
*
956 -TTTGATAACCTTC-TATCAAA
1 TTTTGATAACCTTCATATGAAA
*
976 TTTTGGT-A-C-TCATTATGAAA
1 TTTTGATAACCTTCA-TATGAAA
*
996 TTGAGACTTTTATAACCTTCATATGAAA
1 -T-----TTTGATAACCTTCATATGAAA
* *
1024 TTTTGATAACC-ACACTATCAAA
1 TTTTGATAACCTTCA-TATGAAA
*
1046 TTTTGATAACCTCCCA-ATGAAGCA
1 TTTTGATAACCT-TCATATGAA--A
*
1070 -TTAG-TAACCTTC-TAATGAAA
1 TTTTGATAACCTTCAT-ATGAAA
* *
1090 TTTTGTTAACC-ACACTATGAAA
1 TTTTGATAACCTTCA-TATGAAA
1112 TTTTTGTATAACCT
1 -TTTTG-ATAACCT
1126 CGTTATGGCA
Statistics
Matches: 197, Mismatches: 28, Indels: 67
0.67 0.10 0.23
Matches are distributed among these distances:
18 2 0.01
19 2 0.01
20 16 0.08
21 33 0.17
22 87 0.44
23 13 0.07
24 13 0.07
25 13 0.07
26 5 0.03
27 2 0.01
28 8 0.04
29 3 0.02
ACGTcount: A:0.35, C:0.16, G:0.10, T:0.39
Consensus pattern (22 bp):
TTTTGATAACCTTCATATGAAA
Found at i:1240 original size:24 final size:22
Alignment explanation
Indices: 1186--1244 Score: 64
Period size: 22 Copynumber: 2.6 Consensus size: 22
1176 AATTAAGCAC
*
1186 CCTATGAAATTTCAATAATCAA
1 CCTATGAAATTTTAATAATCAA
* * *
1208 CCTAAGAAATTTTAATAACCTGAT
1 CCTATGAAATTTTAATAA--TCAA
1232 CCTATGAAATTTT
1 CCTATGAAATTTT
1245 GGTAGCCACT
Statistics
Matches: 30, Mismatches: 5, Indels: 2
0.81 0.14 0.05
Matches are distributed among these distances:
22 16 0.53
24 14 0.47
ACGTcount: A:0.41, C:0.17, G:0.07, T:0.36
Consensus pattern (22 bp):
CCTATGAAATTTTAATAATCAA
Found at i:1261 original size:22 final size:22
Alignment explanation
Indices: 1233--1289 Score: 87
Period size: 22 Copynumber: 2.6 Consensus size: 22
1223 TAACCTGATC
* *
1233 CTATGAAATTTTGGTAGCCACT
1 CTATGAAATTTTGGTAACCACA
*
1255 CTATGAAATTTTGGTAACTACA
1 CTATGAAATTTTGGTAACCACA
1277 CTATGAAATTTTG
1 CTATGAAATTTTG
1290 ATCATGACTG
Statistics
Matches: 32, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 32 1.00
ACGTcount: A:0.32, C:0.14, G:0.16, T:0.39
Consensus pattern (22 bp):
CTATGAAATTTTGGTAACCACA
Found at i:2078 original size:22 final size:22
Alignment explanation
Indices: 2051--2104 Score: 90
Period size: 22 Copynumber: 2.5 Consensus size: 22
2041 AAAAAATAAA
*
2051 TTTGGTAACCATACTATGAAAT
1 TTTGGTAACCACACTATGAAAT
2073 TTTGGTAACCACACTATGAAAT
1 TTTGGTAACCACACTATGAAAT
*
2095 TTTGATAACC
1 TTTGGTAACC
2105 TCCTCATAGA
Statistics
Matches: 30, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
22 30 1.00
ACGTcount: A:0.35, C:0.17, G:0.13, T:0.35
Consensus pattern (22 bp):
TTTGGTAACCACACTATGAAAT
Found at i:2117 original size:22 final size:22
Alignment explanation
Indices: 2051--2149 Score: 80
Period size: 22 Copynumber: 4.5 Consensus size: 22
2041 AAAAAATAAA
*
2051 TTTGGTAACCATACT-ATGAAAT
1 TTTGATAACCAT-CTCATGAAAT
* *
2073 TTTGGTAACCA-CACTATGAAAT
1 TTTGATAACCATCTC-ATGAAAT
2095 TTTGATAACC-TCCTCAT-AGAAT
1 TTTGATAACCAT-CTCATGA-AAT
* * *
2117 TATAATAACCATCTTATGAAAT
1 TTTGATAACCATCTCATGAAAT
2139 TTTGATAACCA
1 TTTGATAACCA
2150 CATAGAGATA
Statistics
Matches: 62, Mismatches: 8, Indels: 14
0.74 0.10 0.17
Matches are distributed among these distances:
20 1 0.02
21 1 0.02
22 56 0.90
23 4 0.06
ACGTcount: A:0.37, C:0.17, G:0.10, T:0.35
Consensus pattern (22 bp):
TTTGATAACCATCTCATGAAAT
Found at i:2482 original size:31 final size:31
Alignment explanation
Indices: 2425--2491 Score: 100
Period size: 31 Copynumber: 2.1 Consensus size: 31
2415 TGACAATTAA
*
2425 GAAATATGTTTTTTAAAAAAAGGGTACAATTG
1 GAAATATG-TTTTTAAAAAAAGGGTACAATCG
2457 GAAATATG-TTTTAAAAATAAGGGTACAATCG
1 GAAATATGTTTTTAAAAA-AAGGGTACAATCG
2488 GAAA
1 GAAA
2492 ACATAAAGTT
Statistics
Matches: 33, Mismatches: 1, Indels: 3
0.89 0.03 0.08
Matches are distributed among these distances:
30 9 0.27
31 16 0.48
32 8 0.24
ACGTcount: A:0.46, C:0.04, G:0.19, T:0.30
Consensus pattern (31 bp):
GAAATATGTTTTTAAAAAAAGGGTACAATCG
Found at i:2658 original size:1 final size:1
Alignment explanation
Indices: 2652--2679 Score: 56
Period size: 1 Copynumber: 28.0 Consensus size: 1
2642 TTTATTTACT
2652 AAAAAAAAAAAAAAAAAAAAAAAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAAAA
2680 CTTTGAACTA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 27 1.00
ACGTcount: A:1.00, C:0.00, G:0.00, T:0.00
Consensus pattern (1 bp):
A
Found at i:8868 original size:206 final size:203
Alignment explanation
Indices: 8469--8881 Score: 485
Period size: 206 Copynumber: 2.0 Consensus size: 203
8459 TATCTTCATT
* * * *
8469 TTTAAGAATCTGCTACAACTTTTTACTCATCTGTAATTATCATCGATTAGTAATTATATATGCTA
1 TTTAAGAATCTGCTACAACTTTTTACTCATATGTAACTATCATCAACTAGTAATTATATATGCTA
**
8534 AGCTTGTATGTATATAAATTAACAGGAATACCGGTACCATTTCCCATCATGCTCTATTTGCCATA
66 AGCTTGTATG-ATATAAA-TAACAGGAATACAAGTACCATTTCCCATCATGCTCTATTTGCCATA
* **
8599 AATTTGTTACTTTTCAAATTATCAGTGTTCTAAGGCATGCTTCTAATCACTTTAAACCATATTCC
129 AATATGAAACTTTTCAAATTATCAGTGTTCTAAGGCATGCTTCT-ATCACTTTAAACCATATTCC
8664 TGCATATGTAC
193 TGCATATGTAC
* * * * *
8675 TTTAAGTATCTGCTGCAACTTTTTACTCATATGTAACTATGATTAACTAGTGATTATATATGCTA
1 TTTAAGAATCTGCTACAACTTTTTACTCATATGTAACTATCATCAACTAGTAATTATATATGCTA
* * *
8740 AGCTTGTATG-TATACA-AACAGGAATGCAAGTACCATTTTTACCAATATCCATGCTCTATTTGC
66 AGCTTGTATGATATAAATAACAGGAATACAAGTACCA--TTT-CC--CAT-CATGCTCTATTTGC
* * * * *
8803 CATCAATATGAAACTTTTCATATTATCACAGTGTTTTAAGGCATGCTT-T-T-ACTTTATAGCAT
125 CATAAATATGAAACTTTTCAAATTAT--CAGTGTTCTAAGGCATGCTTCTATCACTTTAAACCAT
*
8865 ATTCCTGCATATTTAC
188 ATTCCTGCATATGTAC
8881 T
1 T
8882 GTAGTGCCTT
Statistics
Matches: 176, Mismatches: 23, Indels: 16
0.82 0.11 0.07
Matches are distributed among these distances:
202 16 0.09
204 8 0.05
205 2 0.01
206 92 0.52
207 3 0.02
208 35 0.20
209 1 0.01
210 19 0.11
ACGTcount: A:0.31, C:0.18, G:0.12, T:0.40
Consensus pattern (203 bp):
TTTAAGAATCTGCTACAACTTTTTACTCATATGTAACTATCATCAACTAGTAATTATATATGCTA
AGCTTGTATGATATAAATAACAGGAATACAAGTACCATTTCCCATCATGCTCTATTTGCCATAAA
TATGAAACTTTTCAAATTATCAGTGTTCTAAGGCATGCTTCTATCACTTTAAACCATATTCCTGC
ATATGTAC
Found at i:13238 original size:2 final size:2
Alignment explanation
Indices: 13231--13261 Score: 53
Period size: 2 Copynumber: 15.5 Consensus size: 2
13221 AAATACATTC
*
13231 TA TA TA TA TA TA TA TA TA TA TA TG TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
13262 GTATGTATTG
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
2 27 1.00
ACGTcount: A:0.45, C:0.00, G:0.03, T:0.52
Consensus pattern (2 bp):
TA
Found at i:13266 original size:12 final size:12
Alignment explanation
Indices: 13231--13269 Score: 60
Period size: 12 Copynumber: 3.2 Consensus size: 12
13221 AAATACATTC
*
13231 TATATATATATA
1 TATATATATATG
13243 TATATATATATG
1 TATATATATATG
*
13255 TATATATGTATG
1 TATATATATATG
13267 TAT
1 TAT
13270 TGAAAGGTTG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
12 25 1.00
ACGTcount: A:0.41, C:0.00, G:0.08, T:0.51
Consensus pattern (12 bp):
TATATATATATG
Found at i:14364 original size:3 final size:3
Alignment explanation
Indices: 14356--14391 Score: 72
Period size: 3 Copynumber: 12.0 Consensus size: 3
14346 ATTACTATCC
14356 ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT
1 ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT
14392 TTTGTATATA
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 33 1.00
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (3 bp):
ATT
Done.