Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014490.1 Corchorus capsularis cultivar CVL-1 contig14511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29010

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2821--2888
31
2.2
31
83
0
82
20
19
22
38
1.94
2829--2961
31
4.6
31
72
16
104
19
21
24
33
1.97
2850--2953
53
2.0
53
82
0
127
20
19
24
36
1.95
4037--4105
30
2.4
30
92
7
117
21
8
11
57
1.60
5140--5181
20
2.0
21
95
4
77
23
19
23
33
1.97
5852--5878
6
4.5
6
100
0
54
85
0
0
14
0.61
8294--8318
2
12.5
2
100
0
50
52
0
48
0
1.00
28684--28710
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!