Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014495.1 Corchorus capsularis cultivar CVL-1 contig14516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11354

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2180--2259
40
2.0
42
82
9
103
51
3
10
35
1.53
2284--2362
40
2.1
36
86
9
104
51
7
12
27
1.66
2650--2682
6
5.5
6
100
0
66
54
15
0
30
1.41
4414--4440
6
4.5
6
100
0
54
55
14
0
29
1.40
6036--7328
331
3.9
332
77
7
1294
35
16
14
33
1.89
7086--7571
243
2.0
244
82
6
585
35
16
13
34
1.88
7326--10074
335
8.2
335
78
6
2738
35
16
14
32
1.89
7326--10062
665
4.1
667
84
4
3557
35
16
14
33
1.89

Tables:   1

The End!