Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014500.1 Corchorus capsularis cultivar CVL-1 contig14521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9989

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3577
325
11.1
321
85
3
4439
33
13
16
35
1.89
1--3570
639
5.5
641
87
4
4510
33
13
16
35
1.89
6097--6161
30
2.1
32
85
5
89
29
13
1
55
1.48
7294--7394
22
4.5
22
75
9
89
36
8
15
38
1.79
7294--7395
44
2.3
44
83
8
118
37
8
15
38
1.79
7310--7395
44
1.9
45
86
6
122
36
9
16
38
1.81
7296--7481
22
8.5
22
67
13
71
41
8
13
36
1.75
7638--7702
31
2.1
31
82
5
78
30
15
3
50
1.59
7720--7828
22
5.0
22
78
7
114
35
11
17
34
1.87
8002--8301
22
13.8
21
67
22
106
42
8
14
35
1.76
8110--8158
25
1.9
26
87
4
73
44
4
14
36
1.64
8178--8309
44
3.0
44
76
10
144
44
9
12
34
1.73
8177--8299
22
5.6
22
80
6
117
43
8
12
34
1.73

Tables:   1

The End!