Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014506.1 Corchorus capsularis cultivar CVL-1 contig14527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7354

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3188--3224
2
18.5
2
100
0
74
51
0
0
48
1.00
3705--3752
22
2.2
22
85
3
62
27
14
4
54
1.59
3889--3948
22
2.7
22
82
5
77
38
11
13
36
1.81
3959--4038
23
3.5
23
79
1
81
38
12
6
42
1.68
3937--4016
23
3.5
23
79
1
81
38
12
8
40
1.74
3913--4187
22
12.8
21
69
13
91
35
14
8
41
1.77
4319--7198
654
4.4
657
85
5
3588
36
16
14
33
1.88
4319--7354
982
3.1
971
76
11
3027
36
16
14
33
1.88

Tables:   1

The End!