Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014512.1 Corchorus capsularis cultivar CVL-1 contig14533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12826

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3860--3904
22
2.0
22
100
0
90
28
26
13
31
1.94
3860--3920
22
2.8
22
90
2
79
29
27
11
31
1.92
3922--3959
13
2.8
14
84
8
51
28
0
2
68
1.03
3996--4056
3
20.0
3
83
9
79
32
3
0
63
1.10
5500--5541
2
21.5
2
85
4
59
45
0
4
50
1.23
9464--9491
2
14.0
2
100
0
56
50
0
0
50
1.00
11967--12017
2
25.5
2
100
0
102
0
49
0
50
1.00

Tables:   1

The End!